A comparison of experimental assays and analytical methods for genome-wide identification of active enhancers | Nature Biotechnology
Enhancer and super‐enhancer: Positive regulators in gene transcription - Peng - 2018 - Animal Models and Experimental Medicine - Wiley Online Library
Homer Software and Data Download
Landscape of Enhancer-Enhancer Cooperative Regulation during Human Cardiac Commitment: Molecular Therapy - Nucleic Acids
De novo identification of enhancers with higher sensitivity in NET-CAGE... | Download Scientific Diagram
Frontiers | Identification and Analysis of p53-Regulated Enhancers in Hepatic Carcinoma
Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations | Nature Genetics
Predicting enhancers in mammalian genomes using supervised hidden Markov models | BMC Bioinformatics | Full Text
A neural network based model effectively predicts enhancers from clinical ATAC-seq samples | Scientific Reports
Solving the transcription start site identification problem with ADAPT-CAGE: a Machine Learning algorithm for the analysis of CAGE data | Scientific Reports
Transcriptionally active enhancers in human cancer cells | Molecular Systems Biology
Enhanced Identification of Transcriptional Enhancers Provides Mechanistic Insights into Diseases: Trends in Genetics
Genome Enhancer analysis summary - geneXplain
Cap analysis of gene expression (CAGE) and noncoding regulatory elements | SpringerLink
De novo identification of transcribed enhancers and super-enhancers in... | Download Scientific Diagram
The GBAF chromatin remodeling complex binds H3K27ac and mediates enhancer transcription | bioRxiv
A High-Resolution Map of Human Enhancer RNA Loci Characterizes Super- enhancer Activities in Cancer - ScienceDirect
CAGE Visual Guide | K.K. DNAFORM
Genomic Feature Datasets for Analysis of Regulatory DNA Elements – Resource for Developmental Regulatory Genomics
CAGE - A highly sensitive and precise means of gene expression analysis.
IJMS | Free Full-Text | Fish-Ing for Enhancers in the Heart
Systematic analysis of enhancer regulatory circuit perturbation driven by copy number variations in malignant glioma
Altered Enhancer and Promoter Usage Leads to Differential Gene Expression in the Normal and Failed Human Heart | Circulation: Heart Failure
Technology Overview | K.K. DNAFORM
Frontiers | Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
Nascent RNA sequencing analysis provides insights into enhancer-mediated gene regulation | BMC Genomics | Full Text
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution | Nature Communications
